This was me today, I'm making a JRPG in GoDot. I made my pause menu today and I tried running it. It took me to my battle scene.. I then kept trying different things with no luck. I then tried running the game... My battle scene popped up! I was so confused, googled it with no solution. Them I started trouble shooting, deleting things til it worked... After that I got autoloader errors, so I removed it from the autoloader.... Somehow that fixed it.. I dont know how but cool.